IL_8INF_140
3D structure
- PDB id
- 8INF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human nuclear pre-60S ribosomal particle - State F'
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUC*GUG(A2M)G
- Length
- 8 nucleotides
- Bulged bases
- 8INF|1|2|G|4522
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8INF_140 not in the Motif Atlas
- Geometric match to IL_5TBW_108
- Geometric discrepancy: 0.1429
- The information below is about IL_5TBW_108
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_54650.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
8INF|1|2|C|4456
8INF|1|2|U|4457
8INF|1|2|C|4458
*
8INF|1|2|G|4520
8INF|1|2|U|4521
8INF|1|2|G|4522
8INF|1|2|A2M|4523
8INF|1|2|G|4524
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain 4
- GTP-binding protein 4
- Chain B
- 60S ribosomal protein L3
- Chain e
- 60S ribosomal protein L23
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