IL_8INF_185

3D structure

PDB id

8INF (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State F'

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGGUAA*UAAAU(E7G)

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: E7G

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8INF|1|2|C|1732
8INF|1|2|G|1733
8INF|1|2|G|1734
8INF|1|2|U|1735
8INF|1|2|A|1736
8INF|1|2|A|1737
*
8INF|1|2|U|1792
8INF|1|2|A|1793
8INF|1|2|A|1794
8INF|1|2|A|1795
8INF|1|2|U|1796
8INF|1|2|E7G|1797

Current chains

Chain 2

28S rRNA

Nearby chains

Chain 5

5S ribosomal RNA; 5S rRNA

Chain R

Translation machinery-associated protein 16

Chain c

60S ribosomal protein L21

Chain p

60S ribosomal protein L7