IL_8IP8_022
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GACU*GCCC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IP8_022 not in the Motif Atlas
- Geometric match to IL_7MLW_007
- Geometric discrepancy: 0.3536
- The information below is about IL_7MLW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49140.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
8IP8|1|RB|G|498
8IP8|1|RB|A|499
8IP8|1|RB|C|500
8IP8|1|RB|U|501
*
8IP8|1|RB|G|618
8IP8|1|RB|C|619
8IP8|1|RB|C|620
8IP8|1|RB|C|621
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain LB
- 60S ribosomal protein eL6
- Chain MB
- 60S ribosomal protein eL33
- Chain QA
- 60S ribosomal protein eL28
- Chain TA
- 60S ribosomal protein eL32
Coloring options: