IL_8IP8_024

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCAAAGCC*GCAGCCG

Length

15 nucleotides

Bulged bases

8IP8|1|RB|C|523, 8IP8|1|RB|A|551

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP8|1|RB|C|522
8IP8|1|RB|C|523
8IP8|1|RB|A|524
8IP8|1|RB|A|525
8IP8|1|RB|A|526
8IP8|1|RB|G|527
8IP8|1|RB|C|528
8IP8|1|RB|C|529
*
8IP8|1|RB|G|549
8IP8|1|RB|C|550
8IP8|1|RB|A|551
8IP8|1|RB|G|552
8IP8|1|RB|C|553
8IP8|1|RB|C|554
8IP8|1|RB|G|555

Current chains

Chain RB

60S ribosomal RNA

Nearby chains

Chain CB

60S ribosomal protein uL30

Chain EB

60S ribosomal protein uL4

Chain XA

60S ribosomal protein eL14

Chain YA

60S ribosomal protein eL20