IL_8IP8_026

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCGACG*UGGGAUG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP8|1|RB|U|683
8IP8|1|RB|C|684
8IP8|1|RB|G|685
8IP8|1|RB|A|686
8IP8|1|RB|C|687
8IP8|1|RB|G|688
*
8IP8|1|RB|U|701
8IP8|1|RB|G|702
8IP8|1|RB|G|703
8IP8|1|RB|G|704
8IP8|1|RB|A|705
8IP8|1|RB|U|706
8IP8|1|RB|G|707

Current chains

Chain RB

60S ribosomal RNA

Nearby chains

Chain EB

60S ribosomal protein uL4

Chain HA

60S ribosomal protein eL15

Chain IA

60S ribosomal protein uL15

Chain JA

60S ribosomal protein eL18

Chain KB

60S ribosomal protein eL13