IL_8IP8_127
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAU*AGCAUG
- Length
- 10 nucleotides
- Bulged bases
- 8IP8|1|RB|C|3137, 8IP8|1|RB|U|3139
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IP8_127 not in the Motif Atlas
- Homologous match to IL_8P9A_342
- Geometric discrepancy: 0.2107
- The information below is about IL_8P9A_342
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
8IP8|1|RB|C|3000
8IP8|1|RB|G|3001
8IP8|1|RB|A|3002
8IP8|1|RB|U|3003
*
8IP8|1|RB|A|3135
8IP8|1|RB|G|3136
8IP8|1|RB|C|3137
8IP8|1|RB|A|3138
8IP8|1|RB|U|3139
8IP8|1|RB|G|3140
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain DB
- 60S ribosomal protein uL3
- Chain FB
- 60S ribosomal protein uL13
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