IL_8IP8_135
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCACGUUAG*CCAAGG
- Length
- 15 nucleotides
- Bulged bases
- 8IP8|1|RB|C|3171, 8IP8|1|RB|A|3177, 8IP8|1|RB|C|3194
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IP8|1|RB|C|3170
8IP8|1|RB|C|3171
8IP8|1|RB|A|3172
8IP8|1|RB|C|3173
8IP8|1|RB|G|3174
8IP8|1|RB|U|3175
8IP8|1|RB|U|3176
8IP8|1|RB|A|3177
8IP8|1|RB|G|3178
*
8IP8|1|RB|C|3193
8IP8|1|RB|C|3194
8IP8|1|RB|A|3195
8IP8|1|RB|A|3196
8IP8|1|RB|G|3197
8IP8|1|RB|G|3198
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain FA
- 60S ribosomal protein uL6
- Chain FB
- 60S ribosomal protein uL13
- Chain LB
- 60S ribosomal protein eL6
- Chain MB
- 60S ribosomal protein eL33
- Chain XA
- 60S ribosomal protein eL14
- Chain YA
- 60S ribosomal protein eL20
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