IL_8IP8_154
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAGUAGUAC*GGAAGUCC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IP8|1|TB|G|70
8IP8|1|TB|A|71
8IP8|1|TB|G|72
8IP8|1|TB|U|73
8IP8|1|TB|A|74
8IP8|1|TB|G|75
8IP8|1|TB|U|76
8IP8|1|TB|A|77
8IP8|1|TB|C|78
*
8IP8|1|TB|G|98
8IP8|1|TB|G|99
8IP8|1|TB|A|100
8IP8|1|TB|A|101
8IP8|1|TB|G|102
8IP8|1|TB|U|103
8IP8|1|TB|C|104
8IP8|1|TB|C|105
Current chains
- Chain TB
- 5S ribosomal RNA
Nearby chains
- Chain CB
- 60S ribosomal protein uL30
- Chain HB
- 60S ribosomal protein uL16
- Chain KA
- 60S ribosomal protein uL18
- Chain RB
- Large subunit ribosomal RNA; LSU rRNA
- Chain YA
- 60S ribosomal protein eL20
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