IL_8IP8_201

3D structure

PDB id

8IP8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 80S ribosome stalled on AUG-Stop boron dependently

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGAG*CAAGCCAUCGCUCUGGAU

Length

22 nucleotides

Bulged bases

8IP8|1|aa|U|786

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP8|1|aa|A|766
8IP8|1|aa|G|767
8IP8|1|aa|A|768
8IP8|1|aa|G|769
*
8IP8|1|aa|C|779
8IP8|1|aa|A|780
8IP8|1|aa|A|781
8IP8|1|aa|G|782
8IP8|1|aa|C|783
8IP8|1|aa|C|784
8IP8|1|aa|A|785
8IP8|1|aa|U|786
8IP8|1|aa|C|787
8IP8|1|aa|G|788
8IP8|1|aa|C|789
8IP8|1|aa|U|790
8IP8|1|aa|C|791
8IP8|1|aa|U|792
8IP8|1|aa|G|793
8IP8|1|aa|G|794
8IP8|1|aa|A|795
8IP8|1|aa|U|796

Current chains

Chain aa

18S ribosomal RNA

Nearby chains

Chain ba

40S ribosomal protein eS24

Chain eb

40S ribosomal protein uS4

Chain ja

40S ribosomal protein eS4