3D structure

PDB id
8IP9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Wheat 40S ribosome in complex with a tRNAi
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UGC*GG
Length
5 nucleotides
Bulged bases
8IP9|1|aa|G|1061
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8IP9|1|aa|U|1060
8IP9|1|aa|G|1061
8IP9|1|aa|C|1062
*
8IP9|1|aa|G|1068
8IP9|1|aa|G|1069

Current chains

Chain aa
18S ribosomal RNA

Nearby chains

Chain bb
40S ribosomal protein eS1
Chain xa
40S ribosomal protein eS27

Coloring options:

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