IL_8IP9_074
3D structure
- PDB id
- 8IP9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 40S ribosome in complex with a tRNAi
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUGC*GAG
- Length
- 7 nucleotides
- Bulged bases
- 8IP9|1|aa|U|1344
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8IP9_074 not in the Motif Atlas
- Homologous match to IL_4V88_455
- Geometric discrepancy: 0.115
- The information below is about IL_4V88_455
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
8IP9|1|aa|C|1343
8IP9|1|aa|U|1344
8IP9|1|aa|G|1345
8IP9|1|aa|C|1346
*
8IP9|1|aa|G|1389
8IP9|1|aa|A|1390
8IP9|1|aa|G|1391
Current chains
- Chain aa
- 18S ribosomal RNA
Nearby chains
- Chain ha
- RACK1
- Chain la
- 40S ribosomal protein uS9
- Chain ma
- 40S ribosomal protein uS10
- Chain qa
- 40S ribosomal protein eS17
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