IL_8IP9_079

3D structure

PDB id

8IP9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 40S ribosome in complex with a tRNAi

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUAUAUAGC*GUAAUC

Length

15 nucleotides

Bulged bases

8IP9|1|aa|U|1522, 8IP9|1|aa|A|1524, 8IP9|1|aa|U|1525

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP9|1|aa|G|1494
8IP9|1|aa|U|1495
8IP9|1|aa|A|1496
8IP9|1|aa|U|1497
8IP9|1|aa|A|1498
8IP9|1|aa|U|1499
8IP9|1|aa|A|1500
8IP9|1|aa|G|1501
8IP9|1|aa|C|1502
*
8IP9|1|aa|G|1521
8IP9|1|aa|U|1522
8IP9|1|aa|A|1523
8IP9|1|aa|A|1524
8IP9|1|aa|U|1525
8IP9|1|aa|C|1526

Current chains

Chain aa

18S ribosomal RNA

Nearby chains

Chain ia

40S ribosomal protein uS3

Chain ma

40S ribosomal protein uS10

Chain wa

40S ribosomal protein uS14