IL_8IP9_098

3D structure

PDB id

8IP9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 40S ribosome in complex with a tRNAi

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AAUACCGG*UCUGGUAAUU

Length

18 nucleotides

Bulged bases

8IP9|1|aa|A|510

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP9|1|aa|A|484
8IP9|1|aa|A|485
8IP9|1|aa|U|486
8IP9|1|aa|A|487
8IP9|1|aa|C|488
8IP9|1|aa|C|489
8IP9|1|aa|G|490
8IP9|1|aa|G|491
*
8IP9|1|aa|U|503
8IP9|1|aa|C|504
8IP9|1|aa|U|505
8IP9|1|aa|G|506
8IP9|1|aa|G|507
8IP9|1|aa|U|508
8IP9|1|aa|A|509
8IP9|1|aa|A|510
8IP9|1|aa|U|511
8IP9|1|aa|U|512

Current chains

Chain aa

18S ribosomal RNA

Nearby chains

Chain eb

40S ribosomal protein uS4

Chain ya

40S ribosomal protein eS30