IL_8IP9_099

3D structure

PDB id

8IP9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wheat 40S ribosome in complex with a tRNAi

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGAG*CAAGCCAUCGCUCUGGAU

Length

22 nucleotides

Bulged bases

8IP9|1|aa|A|785, 8IP9|1|aa|U|786, 8IP9|1|aa|C|787, 8IP9|1|aa|G|788

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IP9|1|aa|A|766
8IP9|1|aa|G|767
8IP9|1|aa|A|768
8IP9|1|aa|G|769
*
8IP9|1|aa|C|779
8IP9|1|aa|A|780
8IP9|1|aa|A|781
8IP9|1|aa|G|782
8IP9|1|aa|C|783
8IP9|1|aa|C|784
8IP9|1|aa|A|785
8IP9|1|aa|U|786
8IP9|1|aa|C|787
8IP9|1|aa|G|788
8IP9|1|aa|C|789
8IP9|1|aa|U|790
8IP9|1|aa|C|791
8IP9|1|aa|U|792
8IP9|1|aa|G|793
8IP9|1|aa|G|794
8IP9|1|aa|A|795
8IP9|1|aa|U|796

Current chains

Chain aa

18S ribosomal RNA

Nearby chains

Chain ba

40S ribosomal protein eS24

Chain eb

40S ribosomal protein uS4

Chain ja

40S ribosomal protein eS4