IL_8IP9_109
3D structure
- PDB id
- 8IP9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 40S ribosome in complex with a tRNAi
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AUUCAACGA*UUGGGAAAUU
- Length
- 19 nucleotides
- Bulged bases
- 8IP9|1|aa|G|1529, 8IP9|1|aa|G|1531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8IP9|1|aa|A|1485
8IP9|1|aa|U|1486
8IP9|1|aa|U|1487
8IP9|1|aa|C|1488
8IP9|1|aa|A|1489
8IP9|1|aa|A|1490
8IP9|1|aa|C|1491
8IP9|1|aa|G|1492
8IP9|1|aa|A|1493
*
8IP9|1|aa|U|1527
8IP9|1|aa|U|1528
8IP9|1|aa|G|1529
8IP9|1|aa|G|1530
8IP9|1|aa|G|1531
8IP9|1|aa|A|1532
8IP9|1|aa|A|1533
8IP9|1|aa|A|1534
8IP9|1|aa|U|1535
8IP9|1|aa|U|1536
Current chains
- Chain aa
- 18S ribosomal RNA
Nearby chains
- Chain ia
- 40S ribosomal protein uS3
- Chain ka
- 40S ribosomal protein uS7
- Chain la
- 40S ribosomal protein uS9
- Chain ma
- 40S ribosomal protein uS10
- Chain ra
- 40S ribosomal protein eS19
- Chain ta
- 40S ribosomal protein eS25
- Chain wa
- 40S ribosomal protein uS14
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