IL_8IPX_022

3D structure

PDB id

8IPX (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State C'

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

8IPX|1|2|U|687

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IPX|1|2|A|466
8IPX|1|2|U|467
8IPX|1|2|U|468
8IPX|1|2|C|469
8IPX|1|2|A|470
8IPX|1|2|A|471
8IPX|1|2|C|472
*
8IPX|1|2|G|682
8IPX|1|2|C|683
8IPX|1|2|G|684
8IPX|1|2|C|685
8IPX|1|2|A|686
8IPX|1|2|U|687
8IPX|1|2|U|688
8IPX|1|2|U|689

Current chains

Chain 2

28S rRNA

Nearby chains

Chain l

60S ribosomal protein L28

Chain o

60S ribosomal protein L6