IL_8IPX_154

3D structure

PDB id

8IPX (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State C'

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GGAAACG*CUCGCC

Length

13 nucleotides

Bulged bases

8IPX|1|2|A|4894, 8IPX|1|2|C|4895, 8IPX|1|2|C|4928

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IPX|1|2|G|4890
8IPX|1|2|G|4891
8IPX|1|2|A|4892
8IPX|1|2|A|4893
8IPX|1|2|A|4894
8IPX|1|2|C|4895
8IPX|1|2|G|4896
*
8IPX|1|2|C|4924
8IPX|1|2|U|4925
8IPX|1|2|C|4926
8IPX|1|2|G|4927
8IPX|1|2|C|4928
8IPX|1|2|C|4929

Current chains

Chain 2

28S rRNA

Nearby chains

Chain S

60S ribosomal protein L14

Chain V

60S ribosomal protein L13a

Chain o

60S ribosomal protein L6