IL_8IPX_173

3D structure

PDB id

8IPX (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State C'

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GCGGACU*AGUGCGCC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IPX|1|2|G|1171
8IPX|1|2|C|1172
8IPX|1|2|G|1173
8IPX|1|2|G|1174
8IPX|1|2|A|1175
8IPX|1|2|C|1176
8IPX|1|2|U|1177
*
8IPX|1|2|A|1184
8IPX|1|2|G|1185
8IPX|1|2|U|1186
8IPX|1|2|G|1187
8IPX|1|2|C|1188
8IPX|1|2|G|1189
8IPX|1|2|C|1190
8IPX|1|2|C|1191

Current chains

Chain 2

28S rRNA

Nearby chains

Chain 3

5S ribosomal RNA; 5S rRNA

Chain R

60S ribosomal protein L5