IL_8JSG_021

3D structure

PDB id

8JSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

ACAAU*AU

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8JSG_021 not in the Motif Atlas

Homologous match to IL_4LFB_015

Geometric discrepancy: 0.1859

The information below is about IL_4LFB_015

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_26900.1

Basepair signature

cWW-cSH-cWS-tWH-cWW

Number of instances in this motif group

5

Unit IDs

8JSG|1|g|A|371
8JSG|1|g|C|372
8JSG|1|g|A|373
8JSG|1|g|A|374
8JSG|1|g|U|375
*
8JSG|1|g|A|389
8JSG|1|g|U|390

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain y

30S ribosomal protein S16