IL_8JSG_077

3D structure

PDB id

8JSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

UAG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8JSG_077 not in the Motif Atlas

Geometric match to IL_6CZR_122

Geometric discrepancy: 0.2202

The information below is about IL_6CZR_122

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

183

Unit IDs

8JSG|1|g|U|1512
8JSG|1|g|A|1513
8JSG|1|g|G|1514
*
8JSG|1|g|C|1521
8JSG|1|g|U|1522
8JSG|1|g|G|1523

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain 2

Small ribosomal subunit protein bS21

Chain q

Small ribosomal subunit protein uS11