IL_8JSG_080
3D structure
- PDB id
- 8JSG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 30S-IF3 complex from Escherichia coli
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- CGCAG*UCAGG
- Length
- 10 nucleotides
- Bulged bases
- 8JSG|1|g|C|758
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8JSG_080 not in the Motif Atlas
- Homologous match to IL_5J7L_027
- Geometric discrepancy: 0.2212
- The information below is about IL_5J7L_027
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
8JSG|1|g|C|580
8JSG|1|g|G|581
8JSG|1|g|C|582
8JSG|1|g|A|583
8JSG|1|g|G|584
*
8JSG|1|g|U|757
8JSG|1|g|C|758
8JSG|1|g|A|759
8JSG|1|g|G|760
8JSG|1|g|G|761
Current chains
- Chain g
- 16S ribosomal RNA
Nearby chains
- Chain P
- Small ribosomal subunit protein uS17
- Chain p
- Small ribosomal subunit protein uS8
- Chain t
- Small ribosomal subunit protein uS12
- Chain u
- Small ribosomal subunit protein uS15
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