IL_8JSG_083

3D structure

PDB id

8JSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

GACGGGGG*CCUUGUAC

Length

16 nucleotides

Bulged bases

8JSG|1|g|A|923, 8JSG|1|g|G|925, 8JSG|1|g|G|926, 8JSG|1|g|A|1394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8JSG|1|g|G|922
8JSG|1|g|A|923
8JSG|1|g|C|924
8JSG|1|g|G|925
8JSG|1|g|G|926
8JSG|1|g|G|927
8JSG|1|g|G|928
8JSG|1|g|G|929
*
8JSG|1|g|C|1388
8JSG|1|g|C|1389
8JSG|1|g|U|1390
8JSG|1|g|U|1391
8JSG|1|g|G|1392
8JSG|1|g|U|1393
8JSG|1|g|A|1394
8JSG|1|g|C|1395

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain 2

Small ribosomal subunit protein bS21

Chain k

Small ribosomal subunit protein uS5