IL_8JSH_014

3D structure

PDB id

8JSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-body-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CUAC*GUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CUAC,GUAG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8JSH_014 not in the Motif Atlas

Geometric match to IL_4K27_002

Geometric discrepancy: 0.3267

The information below is about IL_4K27_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_77658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

8JSH|1|g|C|153
8JSH|1|g|U|154
8JSH|1|g|A|155
8JSH|1|g|C|156
*
8JSH|1|g|G|165
8JSH|1|g|U|166
8JSH|1|g|A|167
8JSH|1|g|G|168

Current chains

Chain g

16S ribosomal RNA

Nearby chains