IL_8JSH_048

3D structure

PDB id

8JSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-body-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

8JSH|1|g|C|1400, 8JSH|1|g|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8JSH_048 not in the Motif Atlas

Homologous match to IL_4LFB_056

Geometric discrepancy: 0.4507

The information below is about IL_4LFB_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

8JSH|1|g|C|1399
8JSH|1|g|C|1400
8JSH|1|g|G|1401
*
8JSH|1|g|C|1501
8JSH|1|g|A|1502
8JSH|1|g|A|1503
8JSH|1|g|G|1504

Current chains

Chain g

16S ribosomal RNA

Nearby chains