IL_8K2B_026

3D structure

PDB id

8K2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosome with Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCAAAUCUUA*UUCAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8K2B|1|L1|G|808
8K2B|1|L1|C|809
8K2B|1|L1|A|810
8K2B|1|L1|A|811
8K2B|1|L1|A|812
8K2B|1|L1|U|813
8K2B|1|L1|C|814
8K2B|1|L1|U|815
8K2B|1|L1|U|816
8K2B|1|L1|A|817
*
8K2B|1|L1|U|978
8K2B|1|L1|U|979
8K2B|1|L1|C|980
8K2B|1|L1|A|981
8K2B|1|L1|G|982
8K2B|1|L1|C|983

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LC

Large ribosomal subunit protein uL3m

Chain LN

Large ribosomal subunit protein uL14m

Chain LS

Large ribosomal subunit protein bL19m