IL_8K2B_031

3D structure

PDB id

8K2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosome with Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAUAAUCACUUG*CCUG

Length

16 nucleotides

Bulged bases

8K2B|1|L1|A|931, 8K2B|1|L1|U|937, 8K2B|1|L1|U|956

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8K2B|1|L1|C|927
8K2B|1|L1|A|928
8K2B|1|L1|U|929
8K2B|1|L1|A|930
8K2B|1|L1|A|931
8K2B|1|L1|U|932
8K2B|1|L1|C|933
8K2B|1|L1|A|934
8K2B|1|L1|C|935
8K2B|1|L1|U|936
8K2B|1|L1|U|937
8K2B|1|L1|G|938
*
8K2B|1|L1|C|954
8K2B|1|L1|C|955
8K2B|1|L1|U|956
8K2B|1|L1|G|957

Current chains

Chain L1

16s rRNA

Nearby chains