IL_8K2B_048

3D structure

PDB id

8K2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosome with Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCG*UAAAG

Length

8 nucleotides

Bulged bases

8K2B|1|L1|A|1359

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8K2B|1|L1|C|1338
8K2B|1|L1|C|1339
8K2B|1|L1|G|1340
*
8K2B|1|L1|U|1357
8K2B|1|L1|A|1358
8K2B|1|L1|A|1359
8K2B|1|L1|A|1360
8K2B|1|L1|G|1361

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LM

Large ribosomal subunit protein uL13m

Chain Lj

Large ribosomal subunit protein bL36m

Chain SR

Large ribosomal subunit protein mL66