IL_8K2B_056

3D structure

PDB id

8K2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human 39S mitoribosome with Tigecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUCUACAAUCAACCAAC*GUCAUU

Length

23 nucleotides

Bulged bases

8K2B|1|L1|C|723, 8K2B|1|L1|A|736

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8K2B|1|L1|A|714
8K2B|1|L1|U|715
8K2B|1|L1|C|716
8K2B|1|L1|U|717
8K2B|1|L1|A|718
8K2B|1|L1|C|719
8K2B|1|L1|A|720
8K2B|1|L1|A|721
8K2B|1|L1|U|722
8K2B|1|L1|C|723
8K2B|1|L1|A|724
8K2B|1|L1|A|725
8K2B|1|L1|C|726
8K2B|1|L1|C|727
8K2B|1|L1|A|728
8K2B|1|L1|A|729
8K2B|1|L1|C|730
*
8K2B|1|L1|G|733
8K2B|1|L1|U|734
8K2B|1|L1|C|735
8K2B|1|L1|A|736
8K2B|1|L1|U|737
8K2B|1|L1|U|738

Current chains

Chain L1

16s rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL2m

Chain Lk

Large ribosomal subunit protein mL37

Chain Sf

Large ribosomal subunit protein mL65