IL_8OH6_358
3D structure
- PDB id
- 8OH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (500umol)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.35 Å
Loop
- Sequence
- CUA*UGGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OH6_358 not in the Motif Atlas
- Geometric match to IL_8C3A_465
- Geometric discrepancy: 0.0639
- The information below is about IL_8C3A_465
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76236.1
- Basepair signature
- cWW-tWH-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8OH6|1|B|C|1375
8OH6|1|B|U|1376
8OH6|1|B|A|1377
*
8OH6|1|B|U|1393
8OH6|1|B|G|1394
8OH6|1|B|G|1395
8OH6|1|B|A|1396
8OH6|1|B|A|1397
8OH6|1|B|G|1398
Current chains
- Chain B
- 18S
Nearby chains
- Chain AR
- Guanine nucleotide-binding protein subunit beta-like protein
- Chain H
- Ribosomal protein S7
- Chain S
- 40S ribosomal protein S16
- Chain T
- 40S ribosomal protein S17-B
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