IL_8OH6_364
3D structure
- PDB id
- 8OH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (500umol)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.35 Å
Loop
- Sequence
- GCCC*GUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OH6_364 not in the Motif Atlas
- Homologous match to IL_8C3A_471
- Geometric discrepancy: 0.0743
- The information below is about IL_8C3A_471
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.2
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8OH6|1|B|G|1625
8OH6|1|B|C|1626
8OH6|1|B|C|1627
8OH6|1|B|C|1628
*
8OH6|1|B|G|1747
8OH6|1|B|U|1748
8OH6|1|B|A|1749
8OH6|1|B|A|1750
8OH6|1|B|C|1751
Current chains
- Chain B
- 18S
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain AO
- 60S ribosomal protein L41
- Chain i
- 60S ribosomal protein CAALFM_C304810CA
Coloring options: