IL_8OI5_039
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CGUAUC*GAAG
- Length
- 10 nucleotides
- Bulged bases
- 8OI5|1|1|A|1099
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OI5_039 not in the Motif Atlas
- Homologous match to IL_8C3A_039
- Geometric discrepancy: 0.0899
- The information below is about IL_8C3A_039
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_59027.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 1
Unit IDs
8OI5|1|1|C|973
8OI5|1|1|G|974
8OI5|1|1|U|975
8OI5|1|1|A|976
8OI5|1|1|U|977
8OI5|1|1|C|978
*
8OI5|1|1|G|1097
8OI5|1|1|A|1098
8OI5|1|1|A|1099
8OI5|1|1|G|1100
Current chains
- Chain 1
- 25S
Nearby chains
- Chain AC
- 60S ribosomal protein L29
- Chain o
- 60S ribosomal protein L7-A
- Chain y
- 60S ribosomal protein L18-A
Coloring options: