IL_8OI5_053
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AUG*CU
- Length
- 5 nucleotides
- Bulged bases
- 8OI5|1|1|U|1177
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OI5_053 not in the Motif Atlas
- Homologous match to IL_8C3A_053
- Geometric discrepancy: 0.0402
- The information below is about IL_8C3A_053
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
8OI5|1|1|A|1176
8OI5|1|1|U|1177
8OI5|1|1|G|1178
*
8OI5|1|1|C|1320
8OI5|1|1|U|1321
Current chains
- Chain 1
- 25S
Nearby chains
- Chain 0
- 60S ribosomal protein L20
- Chain AG
- 60S ribosomal protein L33-A
- Chain o
- 60S ribosomal protein L7-A
- Chain u
- 60S ribosomal protein L14-B
- Chain w
- Ribosomal protein L13
Coloring options: