IL_8OI5_059
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CAG*CG
- Length
- 5 nucleotides
- Bulged bases
- 8OI5|1|1|A|1382
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OI5_059 not in the Motif Atlas
- Homologous match to IL_8C3A_062
- Geometric discrepancy: 0.0807
- The information below is about IL_8C3A_062
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
8OI5|1|1|C|1381
8OI5|1|1|A|1382
8OI5|1|1|G|1383
*
8OI5|1|1|C|1416
8OI5|1|1|G|1417
Current chains
- Chain 1
- 25S
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AF
- 60S ribosomal protein L32
- Chain l
- 60S ribosomal protein L4-B
- Chain n
- 60S ribosomal protein L6
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