IL_8OI5_094

3D structure

PDB id

8OI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAA*UACC

Length

7 nucleotides

Bulged bases

8OI5|1|1|A|2375, 8OI5|1|1|C|2955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8OI5_094 not in the Motif Atlas

Homologous match to IL_8P9A_320

Geometric discrepancy: 0.0488

The information below is about IL_8P9A_320

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83389.2

Basepair signature

cWW-cWW

Number of instances in this motif group

5

Unit IDs

8OI5|1|1|G|2374
8OI5|1|1|A|2375
8OI5|1|1|A|2376
*
8OI5|1|1|U|2953
8OI5|1|1|A|2954
8OI5|1|1|C|2955
8OI5|1|1|C|2956

Current chains

Chain 1

25S

Nearby chains

Chain k

60S ribosomal protein L3

Chain x

Ribosomal protein L22