IL_8OI5_106
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UCAAG*CGACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OI5_106 not in the Motif Atlas
- Homologous match to IL_8C3A_114
- Geometric discrepancy: 0.0428
- The information below is about IL_8C3A_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65585.1
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
8OI5|1|1|U|2807
8OI5|1|1|C|2808
8OI5|1|1|A|2809
8OI5|1|1|A|2810
8OI5|1|1|G|2811
*
8OI5|1|1|C|2821
8OI5|1|1|G|2822
8OI5|1|1|A|2823
8OI5|1|1|C|2824
8OI5|1|1|A|2825
Current chains
- Chain 1
- 25S
Nearby chains
- Chain AN
- 60S ribosomal protein L40-B
- Chain r
- 60S ribosomal protein L10
Coloring options: