IL_8OI5_120
3D structure
- PDB id
- 8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AUUAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- 8OI5|1|1|A|3102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OI5_120 not in the Motif Atlas
- Homologous match to IL_8C3A_129
- Geometric discrepancy: 0.0501
- The information below is about IL_8C3A_129
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
8OI5|1|1|A|3075
8OI5|1|1|U|3076
8OI5|1|1|U|3077
8OI5|1|1|A|3078
8OI5|1|1|U|3079
*
8OI5|1|1|A|3099
8OI5|1|1|G|3100
8OI5|1|1|A|3101
8OI5|1|1|A|3102
8OI5|1|1|U|3103
Current chains
- Chain 1
- 25S
Nearby chains
- Chain AN
- 60S ribosomal protein L40-B
- Chain q
- 60S ribosomal protein L9-B
- Chain w
- Ribosomal protein L13
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