3D structure

PDB id
8OI5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
UGGCCGGUC*GUACUGGACCCA
Length
21 nucleotides
Bulged bases
8OI5|1|B|C|679
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8OI5|1|B|U|648
8OI5|1|B|G|649
8OI5|1|B|G|650
8OI5|1|B|C|651
8OI5|1|B|C|652
8OI5|1|B|G|653
8OI5|1|B|G|654
8OI5|1|B|U|655
8OI5|1|B|C|656
*
8OI5|1|B|G|671
8OI5|1|B|U|672
8OI5|1|B|A|673
8OI5|1|B|C|674
8OI5|1|B|U|675
8OI5|1|B|G|676
8OI5|1|B|G|677
8OI5|1|B|A|678
8OI5|1|B|C|679
8OI5|1|B|C|680
8OI5|1|B|C|681
8OI5|1|B|A|682

Current chains

Chain B
18S

Nearby chains

Chain L
Ribosomal protein S4

Coloring options:

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