IL_8OIN_025

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

ACAUC*GCCAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|AA|A|537
8OIN|1|AA|C|538
8OIN|1|AA|A|539
8OIN|1|AA|U|540
8OIN|1|AA|C|541
*
8OIN|1|AA|G|824
8OIN|1|AA|C|825
8OIN|1|AA|C|826
8OIN|1|AA|A|827
8OIN|1|AA|U|828

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AF

Mitochondrial ribosomal protein S7

Chain AI

mRNA

Chain Ac

Coiled-coil-helix-coiled-coil-helix domain containing 1

Chain Ag

uS9m