IL_8OIN_034

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAAAG*CCAAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|AA|C|749
8OIN|1|AA|G|750
8OIN|1|AA|A|751
8OIN|1|AA|A|752
8OIN|1|AA|A|753
8OIN|1|AA|G|754
*
8OIN|1|AA|C|773
8OIN|1|AA|C|774
8OIN|1|AA|A|775
8OIN|1|AA|A|776
8OIN|1|AA|A|777
8OIN|1|AA|G|778

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AF

Mitochondrial ribosomal protein S7

Chain AX

Death associated protein 3

Chain Bp

Mitochondrial ribosomal protein L40

Chain Bw

39S ribosomal protein L48, mitochondrial