IL_8OIN_048
3D structure
- PDB id
- 8OIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CU*ACG
- Length
- 5 nucleotides
- Bulged bases
- 8OIN|1|B8|C|104
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIN_048 not in the Motif Atlas
- Homologous match to IL_7A0S_002
- Geometric discrepancy: 0.1833
- The information below is about IL_7A0S_002
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 160
Unit IDs
8OIN|1|B8|C|12
8OIN|1|B8|U|13
*
8OIN|1|B8|A|103
8OIN|1|B8|C|104
8OIN|1|B8|G|105
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BE
- Mitochondrial ribosomal protein L28
- Chain BF
- Mitochondrial ribosomal protein L47
- Chain BN
- Mitochondrial ribosomal protein L4
- Chain BY
- Mitochondrial ribosomal protein L20
- Chain Bt
- mL44
- Chain Bz
- Mitochondrial ribosomal protein L51
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