IL_8OIN_094
3D structure
- PDB id
- 8OIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCAA*UAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIN_094 not in the Motif Atlas
- Homologous match to IL_7RQB_093
- Geometric discrepancy: 0.1653
- The information below is about IL_7RQB_093
- Detailed Annotation
- Major groove platform with extra pair
- Broad Annotation
- Major groove platform
- Motif group
- IL_63450.2
- Basepair signature
- cWW-cWW-cSH-cWW
- Number of instances in this motif group
- 8
Unit IDs
8OIN|1|B8|G|1279
8OIN|1|B8|C|1280
8OIN|1|B8|A|1281
8OIN|1|B8|A|1282
*
8OIN|1|B8|U|1316
8OIN|1|B8|A|1317
8OIN|1|B8|C|1318
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain Aa
- Peptide chain release factor 1, mitochondrial
- Chain BP
- Mitochondrial ribosomal protein L10
- Chain BU
- uL16m
- Chain Be
- Mitochondrial ribosomal protein L57
Coloring options: