IL_8OIN_111

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCACA*UAGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|AA|G|116
8OIN|1|AA|C|117
8OIN|1|AA|A|118
8OIN|1|AA|C|119
8OIN|1|AA|A|120
*
8OIN|1|AA|U|131
8OIN|1|AA|A|132
8OIN|1|AA|G|133
8OIN|1|AA|C|134

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AD

Aurora kinase A interacting protein 1

Chain AL

28S ribosomal protein S15, mitochondrial

Chain AN

uS17m