IL_8OIN_124

3D structure

PDB id

8OIN (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAA*UAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8OIN_124 not in the Motif Atlas

Homologous match to IL_1FIR_001

Geometric discrepancy: 0.2607

The information below is about IL_1FIR_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIN|1|B9|U|3
8OIN|1|B9|A|4
8OIN|1|B9|A|5
*
8OIN|1|B9|U|65
8OIN|1|B9|A|66
8OIN|1|B9|A|67

Current chains

Chain B9

CP Phe-tRNA

Nearby chains

Chain Bp

Mitochondrial ribosomal protein L40

Chain Bv

Mitochondrial ribosomal protein L46