IL_8OIQ_031

3D structure

PDB id

8OIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AAA*UCU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8OIQ_031 not in the Motif Atlas

Homologous match to IL_5J7L_305

Geometric discrepancy: 0.1746

The information below is about IL_5J7L_305

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_67095.2

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

8OIQ|1|B8|A|798
8OIQ|1|B8|A|799
8OIQ|1|B8|A|800
*
8OIQ|1|B8|U|990
8OIQ|1|B8|C|991
8OIQ|1|B8|U|992

Current chains

Chain B8

16S rRNA

Nearby chains

Chain BM

ICT1

Chain BS

Mitochondrial ribosomal protein L14

Chain BX

39S ribosomal protein L19, mitochondrial