IL_8OIQ_033
3D structure
- PDB id
- 8OIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- ACUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 8OIQ|1|B8|G|987
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIQ_033 not in the Motif Atlas
- Homologous match to IL_4WF9_065
- Geometric discrepancy: 0.1413
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
8OIQ|1|B8|A|804
8OIQ|1|B8|C|805
8OIQ|1|B8|U|806
8OIQ|1|B8|C|807
8OIQ|1|B8|G|808
8OIQ|1|B8|G|809
*
8OIQ|1|B8|C|985
8OIQ|1|B8|U|986
8OIQ|1|B8|G|987
8OIQ|1|B8|U|988
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BM
- ICT1
- Chain BS
- Mitochondrial ribosomal protein L14
- Chain BX
- 39S ribosomal protein L19, mitochondrial
Coloring options: