IL_8OIR_030

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUGCUCAG*CCCAUG

Length

15 nucleotides

Bulged bases

8OIR|1|AA|C|603, 8OIR|1|AA|C|695, 8OIR|1|AA|U|697

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|AA|C|597
8OIR|1|AA|U|598
8OIR|1|AA|U|599
8OIR|1|AA|G|600
8OIR|1|AA|C|601
8OIR|1|AA|U|602
8OIR|1|AA|C|603
8OIR|1|AA|A|604
8OIR|1|AA|G|605
*
8OIR|1|AA|C|693
8OIR|1|AA|C|694
8OIR|1|AA|C|695
8OIR|1|AA|A|696
8OIR|1|AA|U|697
8OIR|1|AA|G|698

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AK

28S ribosomal protein S14, mitochondrial

Chain AZ

28S ribosomal protein S33, mitochondrial

Chain Aa

Peptide chain release factor 1, mitochondrial

Chain Ad

28S ribosomal protein S5, mitochondrial