IL_8OIR_032
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAUAC*GUG
- Length
- 8 nucleotides
- Bulged bases
- 8OIR|1|AA|U|612
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIR_032 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.1493
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
8OIR|1|AA|U|610
8OIR|1|AA|A|611
8OIR|1|AA|U|612
8OIR|1|AA|A|613
8OIR|1|AA|C|614
*
8OIR|1|AA|G|687
8OIR|1|AA|U|688
8OIR|1|AA|G|689
Current chains
- Chain AA
- 12S rRNA
Nearby chains
- Chain AC
- 28S ribosomal protein S24, mitochondrial
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain AI
- mRNA
- Chain AK
- 28S ribosomal protein S14, mitochondrial
- Chain AZ
- 28S ribosomal protein S33, mitochondrial
- Chain Aa
- Peptide chain release factor 1, mitochondrial
- Chain Ad
- 28S ribosomal protein S5, mitochondrial
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