IL_8OIR_038

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGAUAG*UCGAAG

Length

12 nucleotides

Bulged bases

8OIR|1|AA|U|744

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|AA|C|741
8OIR|1|AA|G|742
8OIR|1|AA|A|743
8OIR|1|AA|U|744
8OIR|1|AA|A|745
8OIR|1|AA|G|746
*
8OIR|1|AA|U|766
8OIR|1|AA|C|767
8OIR|1|AA|G|768
8OIR|1|AA|A|769
8OIR|1|AA|A|770
8OIR|1|AA|G|771

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AX

28S ribosomal protein S29, mitochondrial

Chain Bd

39S ribosomal protein L55, mitochondrial

Chain Bp

39S ribosomal protein L40, mitochondrial

Chain Bw

39S ribosomal protein L48, mitochondrial