IL_8OIR_046

3D structure

PDB id

8OIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S human mitochondrial ribosome with mtRF1 and P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAAA*UACG

Length

8 nucleotides

Bulged bases

8OIR|1|AA|A|866

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8OIR|1|AA|C|864
8OIR|1|AA|A|865
8OIR|1|AA|A|866
8OIR|1|AA|A|867
*
8OIR|1|AA|U|888
8OIR|1|AA|A|889
8OIR|1|AA|C|890
8OIR|1|AA|G|891

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AD

Aurora kinase A-interacting protein

Chain AL

28S ribosomal protein S15, mitochondrial

Chain Aj

28S ribosomal protein S34, mitochondrial

Chain BS

39S ribosomal protein L14, mitochondrial

Chain BX

39S ribosomal protein L19, mitochondrial