IL_8OIR_063
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCCACAG*CCCCUUG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8OIR_063 not in the Motif Atlas
- Geometric match to IL_5XWG_002
- Geometric discrepancy: 0.2532
- The information below is about IL_5XWG_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74768.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
8OIR|1|B8|C|387
8OIR|1|B8|C|388
8OIR|1|B8|C|389
8OIR|1|B8|A|390
8OIR|1|B8|C|391
8OIR|1|B8|A|392
8OIR|1|B8|G|393
*
8OIR|1|B8|C|406
8OIR|1|B8|C|407
8OIR|1|B8|C|408
8OIR|1|B8|C|409
8OIR|1|B8|U|410
8OIR|1|B8|U|411
8OIR|1|B8|G|412
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BD
- 39S ribosomal protein L27, mitochondrial
- Chain BG
- 39S ribosomal protein L30, mitochondrial
- Chain Ba
- 39S ribosomal protein L52, mitochondrial
- Chain Be
- Ribosomal protein 63, mitochondrial
- Chain Bn
- 39S ribosomal protein L38, mitochondrial
- Chain Bw
- 39S ribosomal protein L48, mitochondrial
Coloring options: